[HTML][HTML] The role of spatial embedding in mouse brain networks constructed from diffusion tractography and tracer injections

S Trinkle, S Foxley, G Wildenberg, N Kasthuri… - Neuroimage, 2021 - Elsevier
data in mice and neural tracer data from the Allen Mouse … of the true mesoscale connectome
of the mouse brain. Furthermore, we … of each brain graph was determined by optimizing the …

Estimating brain connectivity with diffusion-weighted magnetic resonance imaging: promise and peril

MD Grier, J Zimmermann, SR Heilbronner - … : Cognitive Neuroscience and …, 2020 - Elsevier
… are used to model neuronal projections and estimate … Herein, we will review publications
comparing anatomical tract tracing … This suggests that subject- or tract-specific optimization may …

[HTML][HTML] Using mesoscopic tract-tracing data to guide the estimation of fiber orientation distributions in the mouse brain from diffusion MRI

Z Liang, TM Arefin, CH Lee, J Zhang - Neuroimage, 2023 - Elsevier
… space, the downloaded axon tracing data of 373 neurons were converted from the original
… The network can be extended to include dMRI data acquired using optimized parameters or …

A systematic review on the quantitative relationship between structural and functional network connectivity strength in mammalian brains

M Straathof, MRT Sinke… - Journal of Cerebral …, 2019 - journals.sagepub.com
The mammalian brain is composed of densely connected and interacting regions, which
form structural and functional networks. An improved understanding of the structure–function …

Discovering hierarchical common brain networks via multimodal deep belief network

S Zhang, Q Dong, W Zhang, H Huang, D Zhu… - Medical image analysis, 2019 - Elsevier
… structures from brain imaging data, eg, fMRI and DTI. … thus take the advantage of large-scale
training samples. For example, … In the future, optimization approaches will be used to decide …

Early adversity changes the economic conditions of structural brain network organisation

S Carozza, J Holmes, PE Vértes, E Bullmore, TM Arefin… - BioRxiv, 2022 - biorxiv.org
neural processes through which early adversity exerts these effects remain largely unknown.
We used generative network modelling of the mouse connectome … used to optimise model …

[HTML][HTML] Cytoarchitecture of the mouse brain by high resolution diffusion magnetic resonance imaging

N Wang, LE White, Y Qi, G Cofer, GA Johnson - Neuroimage, 2020 - Elsevier
… In a previous work for the mouse brain connectome, the … The goal of this present work is to
optimize MRH methods for … In vivo human brain DTI at submillimeter isotropic resolution (0.85 …

[HTML][HTML] Structurally constrained effective brain connectivity

A Crimi, L Dodero, F Sambataro, V Murino, D Sona - NeuroImage, 2021 - Elsevier
… or regulatory pathways within neurons to the interactions between … the connectome, the
graph nodes were determined using the … We optimized the weights for the direct and indirect …

Evolution of brain connections: integrating diffusion MR tractography with gene expression highlights increased corticocortical projections in primates

CJ Charvet, A Palani, P Kabaria, E Takahashi - Cerebral Cortex, 2019 - academic.oup.com
connectome, which is one of the most comprehensive data-sets to map mouse brain connectivity,
from anterograde viral neuronal … We successfully traced the cingulum bundle (E), fornix …

The evolution of Big Data in neuroscience and neurology

L Dipietro, P Gonzalez-Mego, C Ramos-Estebanez… - Journal of Big Data, 2023 - Springer
… aimed at optimizing the use of Big Data in Neuroscience and … -level topology of the brain”)
via DTI and simulation studies … brain imaging phenotypes (see, the 60 + center large-scale